QuickBooks to ShipStation Integration | MESA

Connect QuickBooks to ShipStation and automate your tasks

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Activity reports

Fully supported

MESA's QuickBooks to ShipStation integration is the fastest way to sync data between the two — without touching a line of code. Choose which fields to send, how they're formatted, and when the sync happens. Start with a pre-built template, customize it with AI, or build something completely unique in under 10 minutes.

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Trusted by 1,000+ Shopify merchants

Why integrate QuickBooks with ShipStation

The QuickBooks to ShipStation integration helps you sync data, automate manual tasks, and keep your stack aligned — without writing code.

Data integration →

Send every Shopify order to QuickBooks automatically

When an order is placed, MESA creates the corresponding record in QuickBooks — customer, line items, amount — without anyone touching it. Your books stay current from the moment a sale happens.

Order automation →

Create QuickBooks invoices from Shopify orders

When a wholesale or B2B order comes in, MESA generates an invoice in QuickBooks and routes it to the right customer account. Your billing process runs without manual data entry between systems.

Customer experience →

Keep customer records consistent across both platforms

When a new customer places their first Shopify order, MESA creates or updates their record in QuickBooks. Your accounting and your store always reflect the same customer data.

Fulfillment operations →

Push every Shopify order to ShipStation the moment it's placed

When an order comes in, MESA sends it to ShipStation with the right shipping method, carrier, and fulfillment rules already applied. Your team picks up a ready-to-ship order, not a configuration task.

Order automation →

Route orders to the right warehouse based on what's in the cart

When an order contains specific products, a wholesale flag, or a regional destination, MESA reads the details and sends it to the correct ShipStation fulfillment location. Every order reaches the right facility without manual sorting.

Customer experience →

Update Shopify the moment ShipStation marks an order shipped

When ShipStation generates a tracking number and marks an order fulfilled, MESA writes the update back to Shopify and triggers any downstream actions — a Klaviyo notification, a customer tag, a loyalty point. Your post-purchase workflow starts the moment fulfillment does.

Build any QuickBooks and ShipStation automation

MESA helps you connect apps to automate repetitive tasks. A trigger is an event that starts a workflow, and actions are the steps that occur when it's running.

Customer Created

Starts when a customer account is created.

Customer Updated

Starts when a customer is updated.

Item Created

Starts when an item is created.

Order Created

Starts when a new order is created in any status other than Awaiting Payment.

Order Shipped

Starts when a fulfilled order is shipped.

Order's Items Shipped

Starts when an item in an order is shipped.

Product Created

Starts when a new product is created.

Product Updated

Starts when a product is updated.

Shipment Created

Starts when a shipment is created for a recent order.

Credit Memo Created

Starts when a credit memo is created.

Customer Created

Starts when a customer is created.

Customer Deleted

Starts when a customer is removed.

Customer Updated

Starts when a customer is modified.

Invoice Created

Starts when an invoice is created.

Invoice Deleted

Starts when an invoice is removed.

Invoice Updated

Starts when an invoice is modified.

Item Created

Starts when an item is created.

Item Deleted

Starts when an item is removed.

Item Updated

Starts when an item is modified.

Add Funds to Carrier Account

Increase the amount of funds to a carrier's account.

Add Tag to Order

Attach a tag to an existing order.

Assign User to Order

Add a user to an existing order.

Create Label for Order

Create a shipping label for an order.

Create Label for Shipment

Create a shipping label for a shipment.

Create Order

Create an order.

Create Ship From Location

Create a ship from location.

Deactivate Store

Deactivate a specific store.

Delete Order

Remove an order.

Delete Ship From Location

Delete a ship from location.

Get List of Carrier Packages

Obtain a list of packages by carrier code.

Get List of Carrier Services

Obtain a list of services by carrier code.

Get List of Customers

Obtain a list of existing customers.

Get List of Fulfillments

Obtain a list of fulfillments.

Get List of Marketplaces

Obtain a list of marketplaces that can be integrated with ShipStation.

Get List of Orders

Obtain a list of existing orders.

Get List of Orders By Tag and Status

Lists all orders that match the specified status and tag.

Get List of Products

Obtain a list of products.

Get List of Products

Obtain a list of products.

Get List of Resource URL IDs

Obtain a list of resource IDs from a resource URL

Get List of Ship From Locations

Obtain a list of ship from locations.

Get List of Users

Obtain a list of users.

Get Shipments

Obtain a list of shipments.

Get Shipping Rates

Obtain a list of shipping rates.

Get Stores

Obtain a list of installed stores on the ShipStation account.

Hold Order

Pause an order.

List Carriers

Obtain a list of shipping carriers.

Mark Order as Shipped

Classify an order as shipped.

Reactivate Store

Reactivate a specific store.

Refresh Store

Initiate a store refresh.

Remove Tag on Order

Delete a tag from an existing order.

Restore Order from On Hold

Unpause an order that is currently on hold.

Retrieve Carrier

Grab all details about the carrier.

Retrieve Customer

Grab all details about the customer.

Retrieve Order

Grab all details about the order.

Retrieve Product

Grab all details about the product.

Retrieve Ship From Location

Grab all details about the ship from location.

Retrieve Store

Grab all details about the store.

Retrieve Store Refresh Status

Grab all details about the refresh status of a given store.

Unsassign User from Order

Remove an user from an existing order.

Update Order

Modify an existing order.

Update Product

Update a product's details.

Update Ship From Location

Modify a ship from location's details.

Update Store

Modify a store's details.

Void Shipment Label

Cancel a shipment label.

Create Account

Create an account.

Create Attachable

Create an attachable.

Create Bill

Create a bill.

Create Class

Create a class.

Create Credit Memo

Create a credit memo.

Create Customer

Create a customer.

Create Department

Create a department.

Create Invoice

Create an invoice.

Create Item

Create an item.

Create Journal Entry

Create a journal entry.

Create or Update Estimate

Create or modify an estimate.

Create Payment

Create a payment.

Create Purchase

Create a purchase.

Create Purchase Order

Create a purchase order.

Create Sales Receipt

Create a sales receipt.

Create Tax Agency

Create a tax agency.

Create Tax Service

Create a tax service.

Create Time Activity

Create a time activity.

Create Transfer

Create a transfer.

Delete Employee

Remove an employee.

Delete Vendor Credit

Remove vendor credit.

Query Account List Report

Request an account list report.

Query Aged Payable Detail Report

Request an aged payable detail report.

Query Aged Payables Report

Request an aged payables report.

Query Aged Receivable Detail Report

Request an aged receivable detail report.

Query Aged Receivables Report

Request an aged receivables report.

Query Balance Sheet Report

Request a balance sheet report.

Query Cash Flow Report

Request a cash flow report.

Query Class Sales Report

Request a class sales report.

Query Credit Memo

Query for credit memos.

Query Customer

Query for customers.

Query Customer Balance Detail Report

Request a customer balance detail report.

Query Customer Balance Report

Request a customer balance report.

Query Customer Income Report

Request a customer income report.

Query Customer Sales Report

Request a customer sales report.

Query Department Sales Report

Request a department sales report.

Query for Invoice

Query for invoices.

Query for Item

Query for items.

Query General Ledger Report

Request a general ledger report.

Query Journal Entry

Query for journal entries.

Query Profit and Less Report

Request a profit and less report.

Query Profit and Loss Detail Report

Request a profit and loss detail report.

Query Report

Request a report.

Query Sales by Product Report

Request a sales by product report.

Query Transaction List Report

Request a transaction list report.

Query Transfer

Query for a transfer.

Query Trial Balance Report

Request a trial balance report.

Query Vendor Balance Detail Report

Request a vendor balance detail report.

Query Vendor Balance Report

Request a vendor balance report.

Query Vendor Expenses Report

Request a vendor expenses report.

Retrieve Account

Grab all details about an account.

Retrieve Attachable

Grab all details about an attachable.

Retrieve Bill

Grab all details about a bill.

Retrieve Bill Payment

Grab all details about a bill payment.

Retrieve Class

Grab all details about a class.

Retrieve Company Information

Grab all details about the company.

Retrieve Credit Memo

Grab all details about a credit memo.

Retrieve Customer

Grab all details about a customer.

Retrieve Department

Grab all detail about a department.

Retrieve Deposit

Grab all details about a deposit.

Retrieve Employee

Grab all details about an employee.

Retrieve Estimate

Grab all details about an estimate.

Retrieve Exchange Rate for Individual Currency Code

Grab all details about an exchange rate for a specific currency code.

Retrieve Invoice

Grab all details about an invoice.

Retrieve Item

Grab all details about an item.

Retrieve Journal Entry

Grab all details about a journal entry.

Retrieve Payment

Grab all details about a payment.

Retrieve Payment Method

Grab all details about a payment method.

Retrieve Preference

Grab all details about a preference.

Retrieve Purchase

Grab all details about a purchase.

Retrieve Purchase Order

Grab all details about a purchase order.

Retrieve Refund Receipt

Grab all details about a refund receipt.

Retrieve Sales Receipt

Grab all details about a sales receipt.

Retrieve Tax Agency

Grab all details about a tax agency.

Retrieve Tax Code

Grab all details about a tax code.

Retrieve Tax Rate

Grab all details about a tax rate.

Retrieve Term

Grab all details about a term.

Retrieve Transfer

Grab all details about a transfer.

Retrieve Vendor

Grab all details about a vendor.

Retrieve Vendor Credit

Grab all details about a vendor credit.

Update Bill Payment

Modify a bill payment.

Update Credit Memo

Modify a credit memo's details.

Update Customer

Update a customer.

Update Deposit

Modify a deposit.

Update Journal Entry

Modify a journal entry's details.

Update Payment Method

Modify a payment method.

Update Preference

Modify a preference.

Update Purchase Order

Modify a purchase order's details.

Update Refund Receipt

Modify a refund receipt.

Update Term

Modify a term.

Update Vendor

Modify a vendor.

Upload Attachments

Upload and link new attachments.

View all

Not just software—partnership

Expert support included

MESA includes hands-on support from automation experts who know how to get things done.

Free workflow setup

We'll build your first workflow with you live. Most merchants walk away with automation saving 5+ hours/week.

Fast response times

Average first response: Same day. Critical issues: Immediate escalation. Complex builds: 24-48 hours.

Managed services available

Personalized workflow reviews, and quarterly check-ins to identify new opportunities as your business grows.

Real humans, always

Chat with real automation experts (not bots). Email support 9am-5pm PST. Google Meet sessions for complex workflows.

Integrate QuickBooks with ShipStation today.

Enjoy a 7-day free trial. Get your first workflow in minutes.

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